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Table 1 Summary of genetic variants associated with exposure (obesity) and outcome (head and neck cancer)

From: Obesity and head and neck cancer risk: a mendelian randomization study

Variables

Source

Year

Searching

Sample size

Region

SNPs with significant (P < 5 × 10− 8)

SNPs without LD [r2, kb (0.01, 10,000)

Exposures

       

 BMI

GWAS-Catlog

2015

Locke et al.14

339,224

European

4,971

84

 BMI adjust for smoking

GWAS-Catlog

2017

Justice et al.15

241,258

European

2,883

22

 WHR

GIANT

2015

Shungin et al.16

224,459

European

506

31

 WHR adjust for BMI

GWAS-Catlog

2015

Shungin et al.16

224,459

European

465

48

 WHR adjust for BMI in non-smoker

GWAS-Catlog

2017

Justice et al.15

241,258

European

1,537

4

 WHR adjust for BMI and smoking

GWAS-Catlog

2017

Justice et al.15

241,258

European

1,537

20

 Whole body fat mass

MRC IEU (UK Biobank)

2018

GWAS ID: ukb-b-19,393

454,137

European

60,088

435

 Lean body mass

GWAS-Catlog

2017

Medina-Gomez et al.17

8,327

European

308

47

 Trunk fat mass

MRC IEU (UK Biobank)

2018

GWAS ID: ukb-b-20,044

454,588

European

61,670

422

Outcomes

       

 Head and neck cancer

MRC IEU (UK Biobank)

2021

GWAS ID: ieu-b-4912

373,122

European

NA

NA

 Oral cavity cancer

MRC IEU (UK Biobank)

2021

GWAS ID: ieu-b-4961

372,373

European

NA

NA

 Oropharyngeal cancer

MRC IEU (UK Biobank)

2021

GWAS ID: ieu-b-4968

372,510

European

NA

NA

 Oral cavity and oropharyngeal cancer

MRC IEU (UK Biobank)

20,211

GWAS ID: ieu-b-4962

372,855

European

NA

NA

  1. Note: SNP, single-nucleotide polymorphisms; BMI, body mass index; WHR, waist-to-hip ratio; GWAS, genome-wide association study; MRC IEU, MRC Integrative Epidemiology Unit database; NA, not applicable; LD, linkage disequilibrium