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Table 3 Details regarding 30 males with azoospermia and oligospermia with chromosome 2 microduplication CNVs and the involved genes

From: Copy number variations (CNVs) and karyotyping analysis in males with azoospermia and oligospermia

Cases

Chromosomal location

Start-End position

Size (Mb)

Azoospermia

Oligospermia

Number of Genes

CNVs involved genes

1

dup(2)(p24.3)

13,540,001–14,340,000

0.80 Mb

Yes

 

6

NACAP9, et al.

2

dup(2)(p24.3)

13,520,001–14,340,000

0.82 Mb

Yes

 

7

NACAP9, et al.

3

dup(2)(p24.3)

13,540,001–14,340,000

0.80 Mb

 

Yes

6

NACAP9, et al.

4

dup(2)(p24.3)

13,540,001–14,340,000

0.80 Mb

Yes

 

6

NACAP9, et al.

5

dup(2)(p24.3)

13,540,001–14,340,000

0.80 Mb

 

Yes

6

NACAP9, et al.

6*

dup(2)(p24.3)

13,540,001–14,300,000

0.76 Mb

 

Yes

6

NACAP9, et al.

7*

dup(2)(p24.3)

13,520,000–14,340,000

0.82 Mb

 

Yes

7

NACAP9, et al.

8*

dup(2)(p24.3)

13,660,001–14,340,000

0.68 Mb

 

Yes

4

LINC00276, et al.

9

dup(2)(p12)

81,160,001–81,260,000

0.10 Mb

Yes

 

1

ANKRD11P1

10

dup(2)(p16.3)

50,980,001–52,200,000

1.22 Mb

Yes

 

10

NRXN1, et al.

11*

dup(2)(p22.2)

36,820,001–37,280,000

0.46 Mb

Yes

 

12

STRN, et al.

12

dup(2)(p23.3)

24,340,000–24,560,000

0.22 Mb

Yes

 

3

ITSN2, et al.

13

dup(2)(p24.1)

23,020,001–23,320,000

0.30 Mb

Yes

 

3

LOC107985792, et al.

14*

dup(2)(q12.2q12.3)

107,160,001–108,400,000

1.24 Mb

Yes

 

23

GACAT1, et al.

15*

dup(2)(q12.3)

108,540,001–109,000,000

0.46 Mb

 

Yes

8

CCDC138, et al.

16*

dup(2)(q13)

110,860,000–110,980,000

0.12 Mb

Yes

 

2

ACOXL, et al.

17

dup(2)(q14.2)

120,100,001–120,500,000

0.40 Mb

Yes

 

14

RALB, et al.

18*

dup(2)(q14.3q21.1)

129,280,001–130,060,000

0.78 Mb

Yes

 

20

RAB6C, et al.

19*

dup(2)(q14.3)

128,880,001–129,240,000

0.36 Mb

Yes

 

0

-

20*

dup(2)(q21.1q21.2)

132,140,001–132,520,000

0.38 Mb

Yes

 

17

ZNF285CP, et al.

21*

dup(2)(q32.1)

188,820,001–189,220,000

0.40 Mb

Yes

 

7

COL3A1, et al.

22

dup(2)(q32.3)

194,200,001–194,860,000

0.66 Mb

Yes

 

5

LINC01821, et al.

23*

dup(2)(q32.3)

195,640,001–196,160,000

0.52 Mb

Yes

 

7

SLC39A10, et al.

24

dup(2)(q32.3)

193,620,001–194,080,000

0.46 Mb

 

Yes

2

SEC61GP1, et al.

25

dup(2)(q34)

210,520,001–211,140,000

0.62 Mb

 

Yes

4

CPS1, et al.

26*

dup(2)(q35)

216,780,001–217,140,000

0.36 Mb

Yes

 

12

IGFBP-AS1, et al.

27*

dup(2)(q36.2)

225,880,001–226,000,000

0.12 Mb

Yes

 

2

LOC105373914, et al.

28

dup(2)(q37.3)

238,120,001–238,620,000

0.50 Mb

Yes

 

17

HES6, et al.

29*

dup(2)(q37.3)

240,620,001–241,160,000

0.54 Mb

 

Yes

18

AGXT, et al.

30

dup(2)(q37.3)

238,180,001–238,560,000

0.38 Mb

 

Yes

14

HES6, et al.

  1. * represent chromosome 2 accompanied by others chromosomal microdeletion and microduplication, was showed in supplemental Table 6. All genes of CNVs covered was showed in supplemental material of excel 2 (sheet 1)