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Table 5 Correlation analysis between COL5A2 and immune marker sets of immune cells in TIMER2.0

From: COL5A2 is a prognostic-related biomarker and correlated with immune infiltrates in gastric cancer based on transcriptomics and single-cell RNA sequencing

Description

Gene markers

STAD

None

Purity

Cor

P

Cor

P

CD8 + T cell

CD8A

0.132

*

0.106

0.0392

CD8B

0.001

0.977

-0.014

0.78

T cell (general)

CD3D

0.098

0.0454

0.066

0.202

CD3E

0.013

0.0359

0.067

0.195

CD2

0.179

**

0.156

*

B cell

CD19

0.023

0.634

0.013

0.805

CA79A

0.039

0.432

0.002

0.969

Monocyte

CD86

0.45

***

0.436

***

CA115(CSF1R)

0.451

***

0.438

***

TAM

CCL2

0.394

***

0.368

***

CD68

0.31

***

0.285

***

IL10

0.433

***

0.423

***

M1 Macrophage

INOS (NOS2)

0.128

*

0.138

*

IRF5

0.216

***

0.214

***

COX2(PTGS2)

0.385

***

0.39

***

M2 Macrophage

CD163

0.513

***

0.489

***

VSIG4

0.497

***

0.484

***

MS4A4A

0.451

***

0.441

***

Neutrophils

CD66b (CEACAM8)

0.012

0.811

0.034

0.507

CD11b (ITGAM)

0.447

***

0.435

***

CCR7

0.107

0.0295

0.079

0.127

Natural killer cell

KIR2DL1

0.133

*

0.138

*

KIR2DL3

0.121

0.0136

0.124

0.0159

KIR2DL4

0.086

0.0813

0.053

0.305

KIR3DL1

0.096

0.0508

0.076

0.137

KIR3DL2

0.126

*

0.12

0.0191

KIR3DL3

-0.038

0.437

-0.023

0.655

KIR2DS4

0.106

0.031

0.092

0.0726

Dendritic cell

HLA-DPB1

0.16

*

0.13

0.0114

HLA-DQB1

0.107

0.0299

0.078

0.13

HLA-DRA

0.167

**

0.146

*

HLA-DPA1

0.148

*

0.121

0.0186

BDCA-1(CD1C)

0.092

0.0609

0.07

0.175

BDCA-4(NRP1)

0.606

***

0.592

***

CD11c (ITGAX)

0.492

***

0.497

***

Th1

T-bet (TBX21)

0.15

*

0.136

*

STAT4

0.234

***

0.223

***

STAT1

0.218

***

0.211

***

IFN-γ (IFNG)

0.119

0.0151

0.11

0.0316

TNF-α (TNF)

0.214

***

0.194

**

Th2

GATA3

0.172

**

0.157

*

STAT6

0.126

*

0.127

0.0131

STAT5A

0.351

***

0.354

***

IL13

0.138

*

0.179

**

Tfh

BCL6

0.315

***

0.279

***

IL21

0.088

0.0744

0.074

0.152

Th17

STAT3

0.4

***

0.389

***

IL17A

-0.04

0.422

-0.051

0.319

Treg

FOXP3

0.216

***

0.248

***

CCR8

0.361

***

0.362

***

STAT5B

0.361

***

0.367

***

TGFβ (TGFB1)

0.508

***

0.498

***

T cell exhaustion

PD-1 (PDCD1)

0.131

*

0.123

0.0163

CTLA4

0.2

***

0.19

**

LAG3

0.15

*

0.121

0.0189

TIM-3 (HAVCR2)

0.482

***

0.471

***

GZMB

0.199

***

0.166

*

  1. STAD Stomach adenocarcinoma, TAM Tumor-associated macrophage
  2. *P < 0.01; **P < 0.001; ***P < 0.0001