Description | Gene markers | STAD | |||
---|---|---|---|---|---|
None | Purity | ||||
Cor | P | Cor | P | ||
CD8 + T cell | CD8A | 0.132 | * | 0.106 | 0.0392 |
CD8B | 0.001 | 0.977 | -0.014 | 0.78 | |
T cell (general) | CD3D | 0.098 | 0.0454 | 0.066 | 0.202 |
CD3E | 0.013 | 0.0359 | 0.067 | 0.195 | |
CD2 | 0.179 | ** | 0.156 | * | |
B cell | CD19 | 0.023 | 0.634 | 0.013 | 0.805 |
CA79A | 0.039 | 0.432 | 0.002 | 0.969 | |
Monocyte | CD86 | 0.45 | *** | 0.436 | *** |
CA115(CSF1R) | 0.451 | *** | 0.438 | *** | |
TAM | CCL2 | 0.394 | *** | 0.368 | *** |
CD68 | 0.31 | *** | 0.285 | *** | |
IL10 | 0.433 | *** | 0.423 | *** | |
M1 Macrophage | INOS (NOS2) | 0.128 | * | 0.138 | * |
IRF5 | 0.216 | *** | 0.214 | *** | |
COX2(PTGS2) | 0.385 | *** | 0.39 | *** | |
M2 Macrophage | CD163 | 0.513 | *** | 0.489 | *** |
VSIG4 | 0.497 | *** | 0.484 | *** | |
MS4A4A | 0.451 | *** | 0.441 | *** | |
Neutrophils | CD66b (CEACAM8) | 0.012 | 0.811 | 0.034 | 0.507 |
CD11b (ITGAM) | 0.447 | *** | 0.435 | *** | |
CCR7 | 0.107 | 0.0295 | 0.079 | 0.127 | |
Natural killer cell | KIR2DL1 | 0.133 | * | 0.138 | * |
KIR2DL3 | 0.121 | 0.0136 | 0.124 | 0.0159 | |
KIR2DL4 | 0.086 | 0.0813 | 0.053 | 0.305 | |
KIR3DL1 | 0.096 | 0.0508 | 0.076 | 0.137 | |
KIR3DL2 | 0.126 | * | 0.12 | 0.0191 | |
KIR3DL3 | -0.038 | 0.437 | -0.023 | 0.655 | |
KIR2DS4 | 0.106 | 0.031 | 0.092 | 0.0726 | |
Dendritic cell | HLA-DPB1 | 0.16 | * | 0.13 | 0.0114 |
HLA-DQB1 | 0.107 | 0.0299 | 0.078 | 0.13 | |
HLA-DRA | 0.167 | ** | 0.146 | * | |
HLA-DPA1 | 0.148 | * | 0.121 | 0.0186 | |
BDCA-1(CD1C) | 0.092 | 0.0609 | 0.07 | 0.175 | |
BDCA-4(NRP1) | 0.606 | *** | 0.592 | *** | |
CD11c (ITGAX) | 0.492 | *** | 0.497 | *** | |
Th1 | T-bet (TBX21) | 0.15 | * | 0.136 | * |
STAT4 | 0.234 | *** | 0.223 | *** | |
STAT1 | 0.218 | *** | 0.211 | *** | |
IFN-γ (IFNG) | 0.119 | 0.0151 | 0.11 | 0.0316 | |
TNF-α (TNF) | 0.214 | *** | 0.194 | ** | |
Th2 | GATA3 | 0.172 | ** | 0.157 | * |
STAT6 | 0.126 | * | 0.127 | 0.0131 | |
STAT5A | 0.351 | *** | 0.354 | *** | |
IL13 | 0.138 | * | 0.179 | ** | |
Tfh | BCL6 | 0.315 | *** | 0.279 | *** |
IL21 | 0.088 | 0.0744 | 0.074 | 0.152 | |
Th17 | STAT3 | 0.4 | *** | 0.389 | *** |
IL17A | -0.04 | 0.422 | -0.051 | 0.319 | |
Treg | FOXP3 | 0.216 | *** | 0.248 | *** |
CCR8 | 0.361 | *** | 0.362 | *** | |
STAT5B | 0.361 | *** | 0.367 | *** | |
TGFβ (TGFB1) | 0.508 | *** | 0.498 | *** | |
T cell exhaustion | PD-1 (PDCD1) | 0.131 | * | 0.123 | 0.0163 |
CTLA4 | 0.2 | *** | 0.19 | ** | |
LAG3 | 0.15 | * | 0.121 | 0.0189 | |
TIM-3 (HAVCR2) | 0.482 | *** | 0.471 | *** | |
GZMB | 0.199 | *** | 0.166 | * |