Table 2 Top 5 gene sets that significantly enriched in OA and normal group
Gene set name | NES | p value | p.adjust | qvalues |
|---|---|---|---|---|
Enriched in OA group. | ||||
 GOLDRATH_EFF_VS_MEMORY_CD8_TCELL_UP | 2.256176107 | 1.00E-10 | 3.25E-08 | 2.50E-08 |
 GOLDRATH_NAIVE_VS_EFF_CD8_TCELL_DN | 2.206479095 | 1.00E-10 | 3.25E-08 | 2.50E-08 |
 GSE11386_NAIVE_VS_MEMORY_BCELL_UP | 2.361586552 | 1.00E-10 | 3.25E-08 | 2.50E-08 |
 GSE13547_CTRL_VS_ANTI_IGM_STIM_BCELL_12H_UP | 2.265169851 | 1.00E-10 | 3.25E-08 | 2.50E-08 |
 GSE15750_DAY6_VS_DAY10_EFF_CD8_TCELL_UP | 2.488187209 | 1.00E-10 | 3.25E-08 | 2.50E-08 |
Enriched in normal group. | ||||
 GSE9988_LOW_LPS_VS_CTRL_TREATED_MONOCYTE_UP | -2.130242333 | 3.95E-10 | 1.09E-07 | 8.41E-08 |
 GSE26343_UNSTIM_VS_LPS_STIM_NFAT5_KO_MACROPHAGE_DN | -2.120165618 | 5.51E-10 | 1.41E-07 | 1.09E-07 |
 GSE46606_UNSTIM_VS_CD40L_IL2_IL5_1DAY_STIMULATED_IRF4HIGH_SORTED_BCELL_DN | -2.098150587 | 1.44E-09 | 3.35E-07 | 2.58E-07 |
 GSE14769_UNSTIM_VS_40MIN_LPS_BMDM_DN | -2.0569626 | 2.57E-09 | 5.21E-07 | 4.01E-07 |
 GSE29617_CTRL_VS_TIV_FLU_VACCINE_PBMC_2008_UP | -2.112167615 | 3.72E-09 | 6.71E-07 | 5.17E-07 |